Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| selenide, water dikinase seld | FD718_16590 | Not Available | + | 3681967 - 3683001 | 36308.5 |
| trna 2-selenouridine(34) synthase mnmh | FD718_16595 | Not Available | + | 3683001 - 3684095 | 41618.7 |
| glucosaminidase | FD718_16600 | Not Available | - | 3684187 - 3685026 | 31539.9 |
| dna topoisomerase iii | FD718_16605 | Not Available | + | 3685191 - 3687179 | 73701.6 |
| ggdef domain-containing protein | FD718_16610 | Not Available | - | 3687221 - 3688837 | 62422.1 |
| hypothetical protein | FD718_16615 | Not Available | + | 3689088 - 3689348 | 10252.9 |
| duf3413 domain-containing protein | FD718_16620 | Not Available | - | 3689389 - 3691257 | 71418.2 |
| duf1414 domain-containing protein | FD718_16625 | Not Available | - | 3691305 - 3691523 | 7888.57 |
| nucleoid-associated protein yejk | FD718_16630 | Not Available | + | 3691600 - 3692613 | 38361.0 |
| nitrous oxide-stimulated promoter family protein | FD718_16635 | Not Available | + | 3692912 - 3693277 | 13973.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.