Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3',5'-cyclic-nucleotide phosphodiesterase | FD718_16490 | Not Available | - | 3657257 - 3658240 | 36285.1 |
| metalloprotease | FD718_16495 | Not Available | - | 3658521 - 3659384 | 31367.2 |
| trna dihydrouridine(16) synthase dusc | FD718_16500 | Not Available | - | 3659625 - 3660569 | 35336.5 |
| upf0149 family protein | FD718_16505 | Not Available | + | 3660751 - 3661374 | 23046.7 |
| disulfide bond formation protein dsbb | FD718_16510 | Not Available | - | 3661453 - 3661965 | 19464.1 |
| na(+)/h(+) antiporter nhab | FD718_16515 | Not Available | - | 3662195 - 3663784 | 57701.9 |
| fatty acid metabolism transcriptional regulator fadr | FD718_16520 | Not Available | + | 3664381 - 3665232 | 32794.2 |
| spovr family protein | FD718_16525 | Not Available | - | 3665316 - 3666845 | 60331.4 |
| yeah/yhbh family protein | FD718_16530 | Not Available | - | 3666932 - 3668203 | 48841.6 |
| prka family serine protein kinase | FD718_16535 | Not Available | - | 3668254 - 3670188 | 74401.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.