Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | FD718_16440 | Not Available | + | 3647348 - 3648166 | 30210.2 |
| o-succinylbenzoate synthase | FD718_16445 | Not Available | + | 3648219 - 3649193 | 35720.9 |
| o-succinylbenzoate--coa ligase | FD718_16450 | Not Available | + | 3649181 - 3650611 | 52998.5 |
| mfs transporter | FD718_16455 | Not Available | - | 3650696 - 3652573 | 69523.5 |
| tetr/acrr family transcriptional regulator | FD718_16460 | Not Available | - | 3652588 - 3653184 | 22738.1 |
| hypothetical protein | FD718_16465 | Not Available | + | 3653777 - 3654637 | 31519.8 |
| tigr02647 family protein | FD718_16470 | Not Available | + | 3654891 - 3655136 | 8869.73 |
| ykgj family cysteine cluster protein | FD718_16475 | Not Available | - | 3655156 - 3655410 | 8966.94 |
| ycgn family cysteine cluster protein | FD718_16480 | Not Available | + | 3655676 - 3656113 | 16941.7 |
| cpbp family intramembrane metalloprotease | FD718_16485 | Not Available | + | 3656278 - 3657129 | 31211.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.