Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | FD718_16390 | Not Available | + | 3636406 - 3638304 | 70341.6 |
| helix-hairpin-helix domain-containing protein | FD718_16395 | Not Available | + | 3638468 - 3638755 | 10446.8 |
| duf1971 domain-containing protein | FD718_16400 | Not Available | - | 3638840 - 3639178 | 12748.9 |
| rhombosortase | FD718_16405 | Not Available | - | 3639265 - 3639822 | 20350.0 |
| dtw domain-containing protein | FD718_16410 | Not Available | + | 3639832 - 3640449 | 23105.8 |
| deoxyguanosinetriphosphate triphosphohydrolase family protein | FD718_16415 | Not Available | - | 3640535 - 3641863 | 50847.8 |
| 5'-deoxynucleotidase | FD718_16420 | Not Available | - | 3641863 - 3642447 | 22306.8 |
| pyridoxal phosphate-dependent aminotransferase | FD718_16425 | Not Available | - | 3642557 - 3643771 | 45449.1 |
| isochorismate synthase | FD718_16430 | Not Available | + | 3644210 - 3645607 | 52632.6 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | FD718_16435 | Not Available | + | 3645589 - 3647364 | 63847.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.