Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class a beta-lactamase | FD718_01020 | Not Available | - | 185390 - 186052 | 24297.3 |
| hypothetical protein | FD718_01025 | Not Available | + | 186255 - 186830 | 21501.5 |
| hypothetical protein | FD718_01030 | Not Available | + | 186887 - 187540 | 24715.2 |
| amidohydrolase | FD718_01035 | Not Available | - | 188072 - 189469 | 50938.6 |
| mate family efflux transporter | FD718_01040 | Not Available | - | 189692 - 191044 | 49106.4 |
| hypothetical protein | FD718_01045 | Not Available | - | 191134 - 191751 | 24176.3 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | FD718_01050 | Not Available | - | 191856 - 192476 | 23793.4 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | FD718_01055 | Not Available | - | 192476 - 193489 | 38255.9 |
| hypothetical protein | FD718_01060 | Not Available | + | 193619 - 194074 | 17728.4 |
| lysm peptidoglycan-binding domain-containing protein | FD718_01065 | Not Available | + | 194259 - 195161 | 32957.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.