Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD718_00785 | Not Available | - | 144953 - 145903 | 35672.8 |
| duf2913 family protein | FD718_00790 | Not Available | + | 146163 - 146774 | 23556.2 |
| nerd domain-containing protein | FD718_00795 | Not Available | - | 146823 - 147431 | 23226.1 |
| tetracyline resistance-associated transcriptional repressor tetc | FD718_00805 | Not Available | + | 148090 - 148683 | 22747.6 |
| tetracycline efflux mfs transporter tet(b) | FD718_00810 | Not Available | - | 148796 - 150001 | 43282.8 |
| tetr family transcriptional regulator | FD718_00815 | Not Available | + | 150080 - 150706 | 23487.2 |
| winged helix-turn-helix transcriptional regulator | FD718_00820 | Not Available | - | 150684 - 151370 | 25297.6 |
| amino acid-binding protein | FD718_00825 | Not Available | - | 151378 - 151764 | 13818.9 |
| transposase | FD718_00835 | Not Available | + | 153208 - 153717 | 19692.5 |
| is3 family transposase | FD718_00840 | Not Available | + | 153798 - 154556 | 29432.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.