Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate decarboxylase | FD718_07425 | Not Available | - | 1604911 - 1606311 | 52792.4 |
| glutaminase a | FD718_07430 | Not Available | - | 1606323 - 1607282 | 34482.0 |
| amino acid permease | FD718_07435 | Not Available | - | 1607293 - 1608819 | 55234.2 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | FD718_07440 | Not Available | - | 1609366 - 1610397 | 36040.5 |
| multidrug dmt transporter permease | FD718_07445 | Not Available | - | 1610733 - 1611035 | 11162.3 |
| dna-3-methyladenine glycosylase i | FD718_07450 | Not Available | + | 1611117 - 1611806 | 26113.6 |
| lysr family transcriptional regulator | FD718_07455 | Not Available | - | 1611803 - 1612690 | 33995.8 |
| tdt family transporter | FD718_07460 | Not Available | + | 1612844 - 1613830 | 35642.0 |
| exodeoxyribonuclease v subunit gamma | FD718_07465 | Not Available | + | 1614032 - 1617487 | 131469.0 |
| exodeoxyribonuclease v subunit beta | FD718_07470 | Not Available | + | 1617781 - 1621446 | 137674.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.