Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit beta | FD718_07260 | Not Available | + | 1568778 - 1569968 | 42629.3 |
| tryptophan synthase subunit alpha | FD718_07265 | Not Available | + | 1569968 - 1570780 | 28680.5 |
| septation protein a | FD718_07270 | Not Available | + | 1570895 - 1571434 | 20622.4 |
| acyl-coa thioester hydrolase ycia | FD718_07275 | Not Available | + | 1571447 - 1571845 | 14188.2 |
| ycii family protein | FD718_07280 | Not Available | + | 1571979 - 1572278 | 11053.1 |
| hypothetical protein | FD718_07285 | Not Available | + | 1572297 - 1572683 | 13641.5 |
| methyltransferase | FD718_07290 | Not Available | - | 1572845 - 1573783 | 35092.0 |
| hypothetical protein | FD718_07295 | Not Available | - | 1573908 - 1574114 | 8240.34 |
| tigr01621 family pseudouridine synthase | FD718_07300 | Not Available | - | 1574324 - 1575007 | 25422.5 |
| sodium-dependent transporter | FD718_07305 | Not Available | - | 1575158 - 1576492 | 48491.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.