Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protease sohb | FD718_07210 | Not Available | - | 1557553 - 1558614 | 38868.0 |
| ycik family oxidoreductase | FD718_07215 | Not Available | + | 1558891 - 1559652 | 27219.8 |
| 23s rrna pseudouridine(2605) synthase rlub | FD718_07220 | Not Available | - | 1559736 - 1560893 | 43946.0 |
| threonylcarbamoyl-amp synthase | FD718_07225 | Not Available | - | 1561253 - 1561876 | 23236.9 |
| php domain-containing protein | FD718_07230 | Not Available | - | 1561896 - 1562765 | 32572.0 |
| 3-deoxy-7-phosphoheptulonate synthase | FD718_07235 | Not Available | + | 1563061 - 1564074 | 36547.6 |
| anthranilate synthase component 1 | FD718_07240 | Not Available | + | 1564074 - 1565732 | 61204.5 |
| aminodeoxychorismate/anthranilate synthase component ii | FD718_07245 | Not Available | + | 1565725 - 1566354 | 22603.2 |
| anthranilate phosphoribosyltransferase | FD718_07250 | Not Available | + | 1566359 - 1567366 | 35594.8 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | FD718_07255 | Not Available | + | 1567376 - 1568785 | 52385.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.