Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nickel/cobalt transporter | FD718_06960 | Not Available | - | 1503254 - 1504345 | 38693.4 |
| duf1007 family protein | FD718_06965 | Not Available | - | 1504368 - 1505024 | 24903.9 |
| marr family transcriptional regulator | FD718_06970 | Not Available | - | 1505248 - 1505703 | 17073.1 |
| duf2955 domain-containing protein | FD718_06975 | Not Available | - | 1505675 - 1506694 | 38293.9 |
| hlyd family secretion protein | FD718_06980 | Not Available | - | 1506707 - 1507756 | 38342.5 |
| trna (pseudouridine(54)-n(1))-methyltransferase trmy | FD718_06985 | Not Available | + | 1507897 - 1508496 | 22263.9 |
| hypothetical protein | FD718_06990 | Not Available | + | 1508519 - 1509001 | 18168.4 |
| gfo/idh/moca family oxidoreductase | FD718_06995 | Not Available | - | 1509120 - 1510106 | 36491.3 |
| iron-containing alcohol dehydrogenase | FD718_07000 | Not Available | - | 1510128 - 1511276 | 41635.7 |
| flavodoxin family protein | FD718_07005 | Not Available | + | 1511559 - 1512173 | 23503.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.