Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | FD718_06860 | Not Available | - | 1475308 - 1476234 | 34709.9 |
| enoyl-coa hydratase/isomerase family protein | FD718_06865 | Not Available | + | 1476382 - 1477197 | 29865.0 |
| reactive intermediate/imine deaminase | FD718_06870 | Not Available | + | 1477661 - 1478926 | 45256.1 |
| ggdef domain-containing protein | FD718_06875 | Not Available | + | 1479321 - 1480973 | 63743.4 |
| glycoside hydrolase family 92 protein | FD718_06880 | Not Available | + | 1481213 - 1483609 | 89001.9 |
| lta synthase family protein | FD718_06885 | Not Available | - | 1483696 - 1485675 | 76190.0 |
| uroporphyrinogen-iii c-methyltransferase | FD718_06890 | Not Available | - | 1485918 - 1486679 | 27627.4 |
| nitrite transporter nirc | FD718_06895 | Not Available | - | 1486701 - 1487519 | 29244.2 |
| nitrite reductase small subunit nird | FD718_06900 | Not Available | - | 1487633 - 1487962 | 12427.8 |
| nitrite reductase large subunit | FD718_06905 | Not Available | - | 1487962 - 1490526 | 93784.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.