Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | FD718_06760 | Not Available | + | 1450997 - 1452595 | 57743.4 |
| phosphoribosylamine--glycine ligase | FD718_06765 | Not Available | + | 1452633 - 1453919 | 45890.7 |
| duf1481 domain-containing protein | FD718_06770 | Not Available | - | 1454048 - 1454740 | 25731.8 |
| dna-binding protein hu-alpha | FD718_06775 | Not Available | - | 1454786 - 1455058 | 9445.35 |
| hlyc/corc family transporter | FD718_06780 | Not Available | + | 1455288 - 1456343 | 39303.9 |
| branched-chain amino acid transport system ii carrier protein | FD718_06785 | Not Available | - | 1456452 - 1457774 | 46352.9 |
| duf416 family protein | FD718_06790 | Not Available | - | 1458336 - 1458923 | 22455.0 |
| d-2-hydroxyacid dehydrogenase | FD718_06795 | Not Available | + | 1458985 - 1459896 | 34347.9 |
| uroporphyrinogen decarboxylase | FD718_06800 | Not Available | - | 1460047 - 1461114 | 39615.9 |
| nad(+) diphosphatase | FD718_06805 | Not Available | - | 1461285 - 1462076 | 29745.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.