Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | FD718_06660 | Not Available | + | 1427524 - 1428153 | 23027.1 |
| marc family protein | FD718_06665 | Not Available | + | 1428246 - 1428878 | 22664.8 |
| duf4212 domain-containing protein | FD718_06670 | Not Available | + | 1429056 - 1429322 | 10147.5 |
| cation acetate symporter | FD718_06675 | Not Available | + | 1429332 - 1431035 | 60854.7 |
| hybrid sensor histidine kinase/response regulator | FD718_06680 | Not Available | - | 1431107 - 1434589 | 128337.0 |
| 3-phenylpropionate mfs transporter | FD718_06685 | Not Available | - | 1434729 - 1435907 | 42931.6 |
| acetate--coa ligase | FD718_06690 | Not Available | + | 1436218 - 1438167 | 71893.1 |
| type ii 3-dehydroquinate dehydratase | FD718_06695 | Not Available | + | 1438674 - 1439126 | 16277.5 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | FD718_06700 | Not Available | + | 1439156 - 1439614 | 16047.2 |
| acetyl-coa carboxylase biotin carboxylase subunit | FD718_06705 | Not Available | + | 1439627 - 1440970 | 49423.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.