Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbc | FD718_06255 | Not Available | + | 1348315 - 1348635 | 11294.3 |
| conjugal transfer protein trbd | FD718_06260 | Not Available | + | 1348644 - 1348937 | 11303.2 |
| conjugal transfer protein trbe | FD718_06265 | Not Available | + | 1348934 - 1351387 | 93145.6 |
| p-type conjugative transfer protein trbj | FD718_06270 | Not Available | + | 1351377 - 1352135 | 28438.5 |
| p-type conjugative transfer protein trbl | FD718_06275 | Not Available | + | 1352147 - 1353604 | 50711.4 |
| type iv secretion system protein | FD718_06280 | Not Available | + | 1353619 - 1354317 | 26603.1 |
| p-type conjugative transfer protein trbg | FD718_06285 | Not Available | + | 1354405 - 1355217 | 30008.1 |
| hypothetical protein | FD718_06290 | Not Available | + | 1355220 - 1355654 | 16528.6 |
| hypothetical protein | FD718_06295 | Not Available | + | 1355641 - 1356903 | 45254.2 |
| hypothetical protein | FD718_06300 | Not Available | + | 1356943 - 1358880 | 72146.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.