Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | FD718_06090 | Not Available | - | 1320681 - 1321484 | 29618.8 |
| abc transporter atp-binding protein | FD718_06095 | Not Available | - | 1321477 - 1322244 | 28791.9 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | FD718_06100 | Not Available | - | 1322254 - 1323087 | 29249.0 |
| carboxymuconolactone decarboxylase family protein | FD718_06105 | Not Available | + | 1323431 - 1323661 | 8666.55 |
| duf229 domain-containing protein | FD718_06110 | Not Available | + | 1323857 - 1325476 | 60597.3 |
| alkaline phosphatase | FD718_06115 | Not Available | + | 1325684 - 1327261 | 57399.1 |
| antibiotic biosynthesis monooxygenase | FD718_06120 | Not Available | + | 1327454 - 1327756 | 11698.5 |
| atp-dependent rna helicase dbpa | FD718_06125 | Not Available | + | 1327887 - 1329278 | 50718.4 |
| fad-dependent oxidoreductase | FD718_06130 | Not Available | - | 1329354 - 1330832 | 54278.4 |
| ompa family protein | FD718_06135 | Not Available | + | 1331220 - 1332227 | 36845.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.