Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tolc family outer membrane protein | FD718_05785 | Not Available | + | 1249809 - 1251119 | 48614.2 |
| ompa family protein | FD718_05790 | Not Available | + | 1251133 - 1251723 | 21527.2 |
| sulfate adenylyltransferase | FD718_05795 | Not Available | + | 1251751 - 1252401 | 24567.6 |
| eal domain-containing protein | FD718_05800 | Not Available | + | 1252407 - 1254332 | 71899.0 |
| type i secretion system permease/atpase | FD718_05805 | Not Available | + | 1254335 - 1256455 | 78431.0 |
| helix-turn-helix domain-containing protein | FD718_05810 | Not Available | + | 1256732 - 1256899 | 6315.73 |
| is3 family transposase | FD718_05815 | Not Available | - | 1256908 - 1258058 | 45159.2 |
| alpa family phage regulatory protein | FD718_05820 | Not Available | + | 1258127 - 1258240 | 4054.78 |
| wyl domain-containing protein | FD718_05825 | Not Available | + | 1258554 - 1259462 | 34390.0 |
| duf1819 family protein | FD718_05830 | Not Available | + | 1259472 - 1260071 | 22600.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.