Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna reductase | FD718_05725 | Not Available | - | 1235356 - 1236609 | 45769.9 |
| outer membrane lipoprotein lolb | FD718_05730 | Not Available | + | 1236870 - 1237523 | 24592.5 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | FD718_05735 | Not Available | + | 1237538 - 1238407 | 31658.8 |
| ribose-phosphate pyrophosphokinase | FD718_05740 | Not Available | + | 1238440 - 1239387 | 34340.4 |
| aminoacyl-trna hydrolase | FD718_05745 | Not Available | + | 1239704 - 1240294 | 21435.9 |
| redox-regulated atpase ychf | FD718_05750 | Not Available | + | 1240356 - 1241447 | 39702.7 |
| Trna-met | Not Available | Not Available | + | 1241780 - 1241856 | Not Available |
| efflux rnd transporter periplasmic adaptor subunit | FD718_05760 | Not Available | + | 1242391 - 1243500 | 39670.5 |
| efflux rnd transporter permease subunit | FD718_05765 | Not Available | + | 1243500 - 1246622 | 113577.0 |
| hlyd family type i secretion periplasmic adaptor subunit | FD718_05780 | Not Available | + | 1248412 - 1249806 | 51702.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.