Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cys-trna(pro) deacylase | FD718_05675 | Not Available | - | 1223370 - 1223849 | 16874.5 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | FD718_05680 | Not Available | - | 1223992 - 1225659 | 61214.7 |
| na+/h+ antiporter nhac family protein | FD718_05685 | Not Available | - | 1225944 - 1227302 | 47165.5 |
| methyl-accepting chemotaxis protein | FD718_05690 | Not Available | + | 1227605 - 1229488 | 68001.8 |
| haaap family serine/threonine permease | FD718_05695 | Not Available | - | 1229585 - 1230844 | 46058.5 |
| 3-deoxy-8-phosphooctulonate synthase | FD718_05700 | Not Available | - | 1231135 - 1231989 | 31265.7 |
| tetratricopeptide repeat protein | FD718_05705 | Not Available | - | 1232004 - 1232813 | 31248.2 |
| invasion protein | FD718_05710 | Not Available | - | 1232855 - 1233235 | 13850.7 |
| peptide chain release factor n(5)-glutamine methyltransferase | FD718_05715 | Not Available | - | 1233248 - 1234096 | 30896.8 |
| peptide chain release factor 1 | FD718_05720 | Not Available | - | 1234098 - 1235186 | 40644.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.