Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| urease subunit alpha | FD718_05225 | Not Available | - | 1137375 - 1139078 | 61056.1 |
| urease subunit beta | FD718_05230 | Not Available | - | 1139081 - 1139395 | 11823.5 |
| urease subunit gamma | FD718_05235 | Not Available | - | 1139405 - 1139707 | 11115.7 |
| urease accessory protein ured | FD718_05240 | Not Available | - | 1139732 - 1140580 | 32129.6 |
| abc transporter substrate-binding protein | FD718_05245 | Not Available | + | 1141101 - 1142675 | 58713.6 |
| abc transporter permease | FD718_05250 | Not Available | + | 1142654 - 1143628 | 35978.6 |
| abc transporter permease | FD718_05255 | Not Available | + | 1143625 - 1144422 | 29580.1 |
| atp-binding cassette domain-containing protein | FD718_05260 | Not Available | + | 1144409 - 1145104 | 25482.8 |
| atp-binding cassette domain-containing protein | FD718_05265 | Not Available | + | 1145097 - 1145693 | 22571.4 |
| hexose-6-phosphate:phosphate antiporter | FD718_05270 | Not Available | - | 1145766 - 1147166 | 50653.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.