Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2057 domain-containing protein | FD718_05120 | Not Available | + | 1109261 - 1109965 | 25677.0 |
| sigma-54-dependent fis family transcriptional regulator | FD718_05125 | Not Available | - | 1110015 - 1111292 | 47925.2 |
| hamp domain-containing protein | FD718_05130 | Not Available | - | 1111279 - 1113648 | 89515.8 |
| extracellular solute-binding protein | FD718_05135 | Not Available | - | 1113651 - 1114892 | 47366.0 |
| yfbu family protein | FD718_05140 | Not Available | - | 1115103 - 1115603 | 19843.6 |
| formate--tetrahydrofolate ligase | FD718_05145 | Not Available | - | 1115863 - 1117617 | 62142.3 |
| pyruvate formate lyase 1-activating protein | FD718_05150 | Not Available | - | 1118236 - 1118982 | 28611.2 |
| u32 family peptidase | FD718_05155 | Not Available | + | 1119292 - 1121187 | 70821.3 |
| formate c-acetyltransferase | FD718_05160 | Not Available | - | 1121378 - 1123651 | 84253.2 |
| formate transporter foca | FD718_05165 | Not Available | - | 1123708 - 1124580 | 31591.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.