Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain 144bp-OG3
Accession NumberVAND00000000.1
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysine--trna ligase | FD718_04865 | Not Available | - | 1040645 - 1042147 | 57014.1 |
| peptide chain release factor 2 | FD718_04870 | Not Available | - | 1042180 - 1043278 | 41026.7 |
| single-stranded-dna-specific exonuclease recj | FD718_04875 | Not Available | - | 1043437 - 1045161 | 62891.8 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | FD718_04880 | Not Available | - | 1045266 - 1045997 | 26387.8 |
| site-specific tyrosine recombinase xerd | FD718_04885 | Not Available | - | 1046172 - 1047068 | 34499.8 |
| flavodoxin fldb | FD718_04890 | Not Available | + | 1047242 - 1047766 | 19646.0 |
| branched-chain amino acid transport system ii carrier protein | FD718_04895 | Not Available | - | 1047841 - 1049154 | 46203.7 |
| methyltransferase | FD718_04900 | Not Available | + | 1049531 - 1050244 | 25666.7 |
| atp-dependent rna helicase srmb | FD718_04905 | Not Available | + | 1050373 - 1051689 | 49424.4 |
| peroxide stress protein yaaa | FD718_04910 | Not Available | - | 1051790 - 1052563 | 29148.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.