Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain WCH065050 115
Accession NumberVALF00000000.1
Gene Summary
Adenine Count
1403282 bp
Thymine Count
1437287 bp
Guanine Count
544832 bp
Cytosine Count
580623 bp
Genome Length
3966024 bp
Protein-coding Genes
3391 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetracycline resistance mfs efflux pump | EDC95_14495 | Not Available | - | 3129357 - 3130520 | 41259.7 |
| pyruvate, phosphate dikinase | EDC95_14500 | Not Available | - | 3130510 - 3133077 | 95499.2 |
| tetr/acrr family transcriptional regulator | EDC95_14505 | Not Available | - | 3133074 - 3133685 | 23497.6 |
| conjugal transfer protein | EDC95_14510 | Not Available | - | 3133830 - 3134732 | 33921.1 |
| nlpc/p60 family protein | EDC95_14515 | Not Available | - | 3134752 - 3135167 | 15177.8 |
| segregation and condensation protein a | EDC95_14520 | Not Available | - | 3135328 - 3136017 | 27442.4 |
| site-2 protease family protein | EDC95_14525 | Not Available | - | 3136047 - 3136643 | 22158.8 |
| arac family transcriptional regulator | EDC95_14530 | Not Available | + | 3136940 - 3137776 | 32987.6 |
| duf2000 domain-containing protein | EDC95_14535 | Not Available | + | 3137797 - 3138219 | 15468.9 |
| d-alanyl-d-alanine carboxypeptidase | EDC95_14540 | Not Available | - | 3138415 - 3139578 | 41995.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.