Klebsiella pneumoniae strain EuSCAPE_HR084

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_HR084 is a Gram-negative, rod-shaped bacterium that typically exists in various arrangements, including singles, pairs, and chains. This strain does not form spores and is characterized as a nonsporulating organism. It is classified as a chemoheterotroph, indicating that it derives its energy from organic compounds, which is consistent with its host-associated habitat. The optimal growth temperature for this strain is 37.0°C, aligning with the temperature found in human hosts, which may suggest its adaptation to specific environments within the host. Klebsiella pneumoniae is known to be a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic conditions. This metabolic versatility may enhance its survival in diverse microenvironments within host organisms. Given its characteristics, strain EuSCAPE_HR084 may play a role in the complex microbial communities associated with the host, potentially influencing the host's health and contributing to its ecological dynamics. Understanding such traits can provide insights into the bacterium's interactions within its environment and its potential implications for microbiome studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_HR084

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_HR084
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_HR084


Gene Summary

Adenine Count

1156755 bp

Thymine Count

1156090 bp

Guanine Count

1567774 bp

Cytosine Count

1544305 bp

Genome Length

5424924 bp

Protein-coding Genes

4854 genes

Non-Coding Genes

312 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyruvate formate-lyaseSAMEA3721116_02451Not AvailablePositive2543764 - 254604685150.7
pyruvate formate-lyase activating enzymeSAMEA3721116_02452Not AvailablePositive2546238 - 254697828272.9
mfs-type transporter protein ycadSAMEA3721116_02453Not AvailableNegative2547141 - 254828941635.6
anaerobic dimethyl sulfoxide reductase subunit cSAMEA3721116_02454Not AvailableNegative2548564 - 254942730978.4
anaerobic dimethyl sulfoxide reductase subunit bSAMEA3721116_02455Not AvailableNegative2549429 - 255004622614.9
anaerobic dimethyl sulfoxide reductase subunit aSAMEA3721116_02456Not AvailableNegative2550057 - 255249589990.1
seryl-trna synthetaseSAMEA3721116_02457Not AvailableNegative2552696 - 255398848606.1
holliday junction dna helicaseSAMEA3721116_02458Not AvailableNegative2554079 - 255542249696.8
outer membrane lipoprotein carrier protein lolaSAMEA3721116_02459Not AvailableNegative2555431 - 255604222559.3
cell division proteinSAMEA3721116_02460Not AvailableNegative2556165 - 2560562159623.0

Displaying genes 2631 – 2640 of 5166 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 49 in total