Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli strain VREC0288
Accession NumberUINN00000000.1
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Transposase | SAMEA3472110_04103 | Not Available | - | 4217209 - 4217796 | 22168.4 |
| Capsid assembly protein | SAMEA3472110_04104 | Not Available | - | 4217806 - 4218138 | 11273.2 |
| Transposase | SAMEA3472110_04105 | Not Available | - | 4218217 - 4219788 | 58705.1 |
| Transposase | SAMEA3472110_04106 | Not Available | - | 4219808 - 4220155 | 13055.0 |
| Truncated transposase | SAMEA3472110_04107 | Not Available | - | 4220155 - 4220802 | 23988.3 |
| uncharacterised protein | SAMEA3472110_04108 | Not Available | + | 4220994 - 4221239 | 8783.36 |
| protein of avirulence locus involved in temperature-dependent protein secretion | SAMEA3472110_04109 | Not Available | + | 4221274 - 4222104 | 30640.1 |
| type vi secretion system lysozyme-like protein | SAMEA3472110_04110 | Not Available | + | 4222101 - 4222595 | 18965.7 |
| Cin | SAMEA3472110_04256 | Not Available | - | 4371992 - 4372357 | 13306.1 |
| Lysis determining protein lyda | SAMEA3472110_04257 | Not Available | + | 4372462 - 4372788 | 11099.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.