Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0288 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1477659 bp
Thymine Count
1466531 bp
Guanine Count
1487187 bp
Cytosine Count
1489797 bp
Genome Length
5922648 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
672 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cellulose synthesis regulatory protein (signal transduction protein) | SAMEA3472110_00049 | Not Available | - | 36805 - 38499 | 64309.6 |
| putative small protein | SAMEA3472110_00050 | Not Available | - | 38670 - 38852 | 6688.89 |
| putative methyl-independent mismatch repair protein | SAMEA3472110_00051 | Not Available | - | 38931 - 39848 | 32134.7 |
| putative dmt superfamily transporter inner membrane protein | SAMEA3472110_00052 | Not Available | + | 40021 - 40941 | 32177.9 |
| patch repair protein | SAMEA3472110_00053 | Not Available | - | 40930 - 41400 | 18074.6 |
| dna-cytosine methyltransferase | SAMEA3472110_00054 | Not Available | - | 41381 - 42799 | 53493.9 |
| putative phosphohydrolase | SAMEA3472110_00055 | Not Available | - | 42866 - 43561 | 25891.7 |
| inner membrane protein yedr | SAMEA3472110_00056 | Not Available | - | 43600 - 43902 | 11339.8 |
| porin ompn | SAMEA3472110_00058 | Not Available | + | 44531 - 45550 | 36513.6 |
| outer membrane protein | SAMEA3472110_00059 | Not Available | + | 45507 - 45707 | 7642.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
