Escherichia coli strain VREC0288

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain VREC0288
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain VREC0288

Accession NumberUINN00000000.1

Gene Summary

Adenine Count

1477659 bp

Thymine Count

1466531 bp

Guanine Count

1487187 bp

Cytosine Count

1489797 bp

Genome Length

5922648 bp

Protein-coding Genes

5107 genes

Non-Coding Genes

672 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
putative n-acetylmuramoyl-l-alanine amidaseSAMEA3472110_05125Not Available-5169053 - 516988331058.1
conserved protein, upf0145 familySAMEA3472110_05126Not Available-5169880 - 517020311437.7
putative type iii effector protein (pentapeptide repeat protein)SAMEA3472110_05127Not Available-5170414 - 517070411167.5
tonb-dependent receptorSAMEA3472110_05173Not Available+5204283 - 520664688428.4
membrane-associated peptidaseSAMEA3472110_05174Not Available+5206711 - 5209494104110.0
glutamate decarboxylase betaSAMEA3472110_05175Not Available+5209856 - 521125652671.0
glutamate/gamma-aminobutyrate antiporter (extreme acid sensitivity protein)SAMEA3472110_05176Not Available+5211412 - 521294755064.0
putative lipoproteinSAMEA3472110_05177Not Available+5213078 - 521439749646.9
putative signal transduction proteinSAMEA3472110_05178Not Available+5214774 - 521615653172.7
heme-regulated cyclic amp phosphodiesterase (direct oxygen sensor protein)SAMEA3472110_05179Not Available+5216181 - 521858090267.6

Displaying genes 5151 – 5160 of 5779 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites