Plesiomonas shigelloides strain NCTC10363

Gram-negativeVibrioMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Plesiomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusPlesiomonas
SpeciesPlesiomonas shigelloides
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeVibrio
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Plesiomonas shigelloides strain NCTC10363

Accession NumberUGTC00000000.1

Gene Summary

Adenine Count

925107 bp

Thymine Count

931263 bp

Guanine Count

989564 bp

Cytosine Count

993162 bp

Genome Length

3839096 bp

Protein-coding Genes

3180 genes

Non-Coding Genes

307 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
toluene efflux pump ttgabc operon repressorNCTC10363_03238Not Available+3491814 - 349250626013.1
catalaseNCTC10363_03239Not Available-3492726 - 349420455938.7
l-2,4-diaminobutyrate decarboxylaseNCTC10363_03240Not Available+3494889 - 349663465193.4
glutamate/gamma-aminobutyrate antiporterNCTC10363_03241Not Available+3496754 - 349820852028.6
glutamate/gamma-aminobutyrate antiporterNCTC10363_03242Not Available+3498279 - 349972451487.2
urease operon transcriptional activatorNCTC10363_03243Not Available-3499853 - 350083035991.2
c4-dicarboxylate transport transcriptional regulatory protein dctdNCTC10363_03244Not Available-3501020 - 350229448686.5
phosphoglycerate transport system sensor protein pgtbNCTC10363_03245Not Available-3502287 - 350457885727.1
phosphoglycerate transport regulatory protein pgtc precursorNCTC10363_03246Not Available-3504618 - 350582045381.7
regulatory protein uhpcNCTC10363_03247Not Available+3506180 - 350751748385.4

Displaying genes 3211 – 3220 of 3487 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

280 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da

Displaying 1–10 of 280 metabolites