Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yghb | NCTC8535_00536 | Not Available | - | 551619 - 552284 | 24530.0 |
| di-/tripeptide transporter | NCTC8535_00537 | Not Available | - | 552614 - 554134 | 55393.1 |
| doxx | NCTC8535_00538 | Not Available | - | 554561 - 554995 | 15607.7 |
| arsenate reductase and related proteins, glutaredoxin family | NCTC8535_00539 | Not Available | - | 555137 - 556015 | 31989.6 |
| d-malate degradation protein r | NCTC8535_00540 | Not Available | + | 556143 - 557039 | 33604.4 |
| uncharacterised protein | NCTC8535_00541 | Not Available | - | 556980 - 557960 | 36061.1 |
| hth-type transcriptional regulator puur | NCTC8535_00542 | Not Available | + | 558101 - 558655 | 20618.2 |
| thiosulfate sulfurtransferase glpe | NCTC8535_00543 | Not Available | + | 558833 - 559882 | 39804.4 |
| hth-type transcriptional regulatory protein gabr | NCTC8535_00544 | Not Available | - | 559902 - 561374 | 54900.9 |
| transport of quorum-sensing signal protein | NCTC8535_00545 | Not Available | + | 561696 - 562733 | 37156.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
