Hafnia alvei strain NCTC8535

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Hafnia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusHafnia
SpeciesHafnia alvei
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathot spring
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hafnia alvei strain NCTC8535

Accession NumberUGHO00000000.1

Gene Summary

Adenine Count

1230251 bp

Thymine Count

1228315 bp

Guanine Count

1165036 bp

Cytosine Count

1166554 bp

Genome Length

4790156 bp

Protein-coding Genes

4107 genes

Non-Coding Genes

376 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
putative ribosomal n-acetyltransferase ydafNCTC8535_04376Not Available-4649127 - 464970522005.4
arsenate reductaseNCTC8535_04377Not Available-4649720 - 465007613492.5
putative zn-dependent protease, contains tpr repeatsNCTC8535_04378Not Available-4650086 - 465157054572.9
pheromone autoinducer 2 transporterNCTC8535_04379Not Available+4651867 - 465293139480.2
putative peroxiredoxin bcpNCTC8535_04380Not Available-4653006 - 465347617623.0
gcv operon repressorNCTC8535_04381Not Available-4653476 - 465404821275.4
dihydrodipicolinate synthaseNCTC8535_04382Not Available+4654192 - 465507331446.1
lipoprotein 34 precursorNCTC8535_04383Not Available+4655090 - 465614237552.1
phosphoribosylaminoimidazole-succinocarboxamide synthaseNCTC8535_04384Not Available+4656308 - 465702126957.6
predicted metalloproteaseNCTC8535_04385Not Available+4657216 - 465809432046.5

Displaying genes 4381 – 4390 of 4483 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

318 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 318 metabolites