Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphocarrier protein npr | NCTC8535_03799 | Not Available | - | 3993051 - 3993323 | 9758.61 |
| glmz(srna)-inactivating ntpase | NCTC8535_03800 | Not Available | - | 3993334 - 3994185 | 32280.7 |
| nitrogen regulatory protein | NCTC8535_03801 | Not Available | - | 3994328 - 3994792 | 16862.5 |
| ribosome hibernation promoting factor hpf | NCTC8535_03802 | Not Available | - | 3994917 - 3995204 | 10952.2 |
| rna polymerase factor sigma-54 | NCTC8535_03803 | Not Available | - | 3995228 - 3996661 | 53783.7 |
| lipopolysaccharide export system atp-binding protein lptb | NCTC8535_03804 | Not Available | - | 3996795 - 3997520 | 26888.5 |
| lipopolysaccharide export system protein lpta precursor | NCTC8535_03805 | Not Available | - | 3997527 - 3998156 | 22273.6 |
| lipopolysaccharide export system protein lptc | NCTC8535_03806 | Not Available | - | 3998125 - 3998703 | 22026.9 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatas kdsc | NCTC8535_03807 | Not Available | - | 3998700 - 3999266 | 20328.7 |
| arabinose 5-phosphate isomerase kdsd | NCTC8535_03808 | Not Available | - | 3999292 - 4000278 | 35058.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
