Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crotonobetainyl-coa dehydrogenase | NCTC8535_03729 | Not Available | + | 3902118 - 3903260 | 42461.6 |
| crotonobetainyl-coa:carnitine coa-transferase | NCTC8535_03730 | Not Available | + | 3903465 - 3904670 | 44342.3 |
| short-chain-fatty-acid--coa ligase | NCTC8535_03731 | Not Available | + | 3904698 - 3906269 | 59285.1 |
| carnitinyl-coa dehydratase | NCTC8535_03732 | Not Available | + | 3906284 - 3907066 | 28014.7 |
| stba protein | NCTC8535_03733 | Not Available | + | 3907723 - 3908775 | 38896.1 |
| uncharacterised protein | NCTC8535_03734 | Not Available | + | 3908768 - 3909451 | 25415.2 |
| antitoxin higa | NCTC8535_03735 | Not Available | - | 3909562 - 3909819 | 9302.98 |
| protein of uncharacterised function (duf1615) | NCTC8535_03736 | Not Available | + | 3910049 - 3911149 | 40430.7 |
| transcriptional activator fear | NCTC8535_03737 | Not Available | + | 3911286 - 3912197 | 33829.2 |
| primary amine oxidase precursor | NCTC8535_03738 | Not Available | + | 3912478 - 3914808 | 86830.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
