Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shimoidei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mycobacterium shimoidei strain P7336
Accession NumberUEGW00000000.1
Gene Summary
Adenine Count
827277 bp
Thymine Count
830940 bp
Guanine Count
1593150 bp
Cytosine Count
1591216 bp
Genome Length
4842631 bp
Protein-coding Genes
4593 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative cytidine deaminase cdd (cytidine aminohydrolase) (cytidine nucleoside deaminase) | MSP7336_00064 | Not Available | - | 60990 - 61388 | 13862.7 |
| succinate dehydrogenase hydrophobic membrane anchor protein | MSP7336_00065 | Not Available | + | 61594 - 61995 | 15091.9 |
| putative succinate dehydrogenase (hydrophobic membrane anchor subunit) sdhd (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase) | MSP7336_00066 | Not Available | + | 61992 - 62426 | 16968.7 |
| putative succinate dehydrogenase (flavoprotein subunit) sdha (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase) | MSP7336_00067 | Not Available | + | 62423 - 64177 | 64212.5 |
| succinate dehydrogenase iron-sulfur subunit | MSP7336_00068 | Not Available | + | 64177 - 64971 | 29587.7 |
| putative transposase fusion protein | MSP7336_00069 | Not Available | + | 65116 - 65703 | 21921.1 |
| pyridoxamine 5'-phosphate oxidase-like fmn-binding protein | MSP7336_00070 | Not Available | - | 65687 - 66169 | 17436.1 |
| putative alternative rna polymerase sigma factor (fragment) sigj | MSP7336_00071 | Not Available | - | 66190 - 67110 | 33015.1 |
| hypothetical protein | MSP7336_00072 | Not Available | + | 67265 - 67951 | 21646.5 |
| hypothetical protein | MSP7336_00073 | Not Available | + | 68001 - 69356 | 49266.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
