Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium shimoidei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827277 bp
Thymine Count
830940 bp
Guanine Count
1593150 bp
Cytosine Count
1591216 bp
Genome Length
4842631 bp
Protein-coding Genes
4593 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative transmembrane serine/threonine-protein kinase e | MSP7336_00414 | Not Available | + | 409784 - 410413 | 22613.3 |
| hypothetical protein | MSP7336_00415 | Not Available | - | 410377 - 410898 | 19133.7 |
| putative bifunctional menaquinone biosynthesis protein mend : 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (shchc synthase) + 2-oxoglutarate decarboxylase (alpha-ketoglutarate decarboxylase) (kdc) | MSP7336_00416 | Not Available | - | 410895 - 412529 | 56837.0 |
| putative peroxidase bpoc (non-heme peroxidase) | MSP7336_00417 | Not Available | - | 412540 - 413328 | 28198.7 |
| thij/pfpi domain-containing protein | MSP7336_00418 | Not Available | - | 413325 - 414062 | 26249.8 |
| putative transcriptional regulatory protein | MSP7336_00419 | Not Available | - | 414087 - 415181 | 39189.4 |
| arac family transcriptional regulator | MSP7336_00420 | Not Available | - | 415197 - 416159 | 34786.5 |
| putative oxidoreductase | MSP7336_00421 | Not Available | - | 416227 - 417372 | 41643.2 |
| o-succinylbenzoate synthase | MSP7336_00422 | Not Available | - | 417419 - 418378 | 34007.1 |
| dgpf domain-containing protein | MSP7336_00423 | Not Available | + | 418451 - 418858 | 15176.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
