Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | SAMEA3472056_00227 | Not Available | + | 232629 - 233555 | 34239.9 |
| membrane protein ybio | SAMEA3472056_00228 | Not Available | - | 233552 - 235777 | 81908.5 |
| glnq protein, subunit of glutamine abc transporter | SAMEA3472056_00229 | Not Available | - | 236038 - 236760 | 26733.6 |
| glutamine transport system permease | SAMEA3472056_00230 | Not Available | - | 236757 - 237416 | 24365.8 |
| glutamine abc transporter, substrate-binding protein | SAMEA3472056_00231 | Not Available | - | 237554 - 238300 | 27191.5 |
| dna starvation/stationary phase protection protein dps | SAMEA3472056_00232 | Not Available | - | 238704 - 239207 | 18696.3 |
| threonine and homoserine efflux system | SAMEA3472056_00233 | Not Available | - | 239506 - 240393 | 31170.4 |
| outer membrane protein x | SAMEA3472056_00234 | Not Available | + | 240746 - 241261 | 18603.6 |
| membrane protein ybip | SAMEA3472056_00235 | Not Available | - | 241310 - 242893 | 59710.3 |
| mn(2)-response protein, mntr-repressed | SAMEA3472056_00236 | Not Available | - | 243165 - 243293 | 5031.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
