Escherichia coli strain SIEC109 118_NODE_121

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain SIEC109 118_NODE_121
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain SIEC109 118_NODE_121

Accession NumberSWMN00000000.1

Gene Summary

Adenine Count

1311805 bp

Thymine Count

1311896 bp

Guanine Count

1349242 bp

Cytosine Count

1350124 bp

Genome Length

5323067 bp

Protein-coding Genes

4778 genes

Non-Coding Genes

460 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
type i toxin-antitoxin system hok family toxinFCU55_26570Not Available-5249341 - 52495537808.85
epoxyqueuosine reductase quehFCU55_26575Not Available-5249734 - 525039925866.8
tn3-like element tn5403 family transposaseFCU55_26585Not Available+5250956 - 5253853108466.0
mrna interferase pemkFCU55_26590Not Available-5253990 - 525432211881.5
antitoxin pemiFCU55_26595Not Available-5254324 - 52545819333.16
cpbp family intramembrane metalloproteaseFCU55_26600Not Available-5254674 - 52549309397.82
conjugal transfer protein trapFCU55_26605Not Available+5254991 - 525557821938.8
duf2689 domain-containing proteinFCU55_26610Not Available+5255517 - 525588513138.1
type iv conjugative transfer system lipoprotein travFCU55_26615Not Available+5255882 - 525639718474.3
conjugal transfer protein trarFCU55_26620Not Available+5256532 - 52567538299.92

Displaying genes 5141 – 5150 of 5238 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites