Escherichia coli strain SIEC109 118_NODE_121

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain SIEC109 118_NODE_121
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain SIEC109 118_NODE_121

Accession NumberSWMN00000000.1

Gene Summary

Adenine Count

1311805 bp

Thymine Count

1311896 bp

Guanine Count

1349242 bp

Cytosine Count

1350124 bp

Genome Length

5323067 bp

Protein-coding Genes

4778 genes

Non-Coding Genes

460 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dotu family type iv/vi secretion system proteinFCU55_26045Not Available-5171702 - 517236725295.7
type vi secretion system baseplate subunit tsskFCU55_26050Not Available-5172364 - 517370149689.8
type vi secretion system contractile sheath large subunitFCU55_26055Not Available-5173719 - 517525757965.6
type vi secretion system contractile sheath small subunitFCU55_26060Not Available-5175316 - 517581618710.3
Trna-metNot AvailableNot Available+5176452 - 5176528Not Available
type-f conjugative transfer system protein trbiFCU55_26070Not Available-5176526 - 517681510860.0
type iv secretion system protein tracFCU55_26075Not Available-5176812 - 517943999165.3
conjugal transfer protein trarFCU55_26080Not Available-5179599 - 51798208313.95
type iv conjugative transfer system lipoprotein travFCU55_26085Not Available-5179955 - 518047018497.2
conjugal transfer protein trbgFCU55_26090Not Available-5180467 - 51807189126.86

Displaying genes 5061 – 5070 of 5238 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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