Escherichia coli strain SIEC109 118_NODE_121

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain SIEC109 118_NODE_121
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain SIEC109 118_NODE_121

SWMN00000000.1

Gene Summary

Adenine Count

1311805 bp

Thymine Count

1311896 bp

Guanine Count

1349242 bp

Cytosine Count

1350124 bp

Genome Length

5323067 bp

Protein-coding Genes

4778 genes

Non-Coding Genes

460 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
type iv toxin-antitoxin system yeeu family antitoxinFCU55_24430Not Available+4915740 - 491610813625.2
toxinFCU55_24435Not Available+4916198 - 491657514145.1
hypothetical proteinFCU55_24440Not Available+4916572 - 491706018032.6
duf957 domain-containing proteinFCU55_24445Not Available+4917077 - 49172536495.66
3-phosphoshikimate 1-carboxyvinyltransferaseFCU55_24525Not Available-4927615 - 492889846210.6
3-phosphoserine/phosphohydroxythreonine transaminaseFCU55_24530Not Available-4928969 - 493005739773.4
duf421 domain-containing proteinFCU55_24535Not Available-4930256 - 493094826269.4
30s ribosomal protein s12 methylthiotransferase accessory protein ycaoFCU55_24540Not Available+4931078 - 493283865672.0
formate transporter focaFCU55_24545Not Available+4933244 - 493410131006.6
porin family proteinFCU55_24630Not Available-4947885 - 494862527208.2

Displaying genes 4831 – 4840 of 5238 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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