Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | FAP39_17220 | Not Available | + | 3532206 - 3532832 | 21744.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | FAP39_17225 | Not Available | + | 3532836 - 3533972 | 41131.0 |
| atp-binding protein | FAP39_17230 | Not Available | - | 3534636 - 3535427 | 28817.9 |
| is21 family transposase | FAP39_17235 | Not Available | - | 3535417 - 3536943 | 58225.0 |
| hypothetical protein | FAP39_17240 | Not Available | + | 3537186 - 3538874 | 64251.6 |
| hypothetical protein | FAP39_17250 | Not Available | - | 3539435 - 3540604 | 42453.2 |
| tandem-95 repeat protein | FAP39_17260 | Not Available | + | 3541473 - 3543636 | 73175.7 |
| tandem-95 repeat protein | FAP39_17265 | Not Available | + | 3543637 - 3545491 | 62852.9 |
| molecular chaperone htpg | FAP39_17270 | Not Available | - | 3545795 - 3547083 | 47656.1 |
| phage tail tape measure protein | FAP39_17275 | Not Available | - | 3547084 - 3548607 | 50699.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.