Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase family protein | FAP39_01055 | Not Available | + | 227525 - 228118 | 22129.5 |
| sseb family protein | FAP39_01060 | Not Available | + | 228096 - 228887 | 27633.6 |
| glyoxylate/hydroxypyruvate reductase a | FAP39_01065 | Not Available | - | 228923 - 229852 | 33772.5 |
| dioxygenase | FAP39_01070 | Not Available | - | 229849 - 230259 | 14985.9 |
| rod shape-determining protein roda | FAP39_01075 | Not Available | - | 230352 - 231491 | 41228.8 |
| penicillin-binding protein 2 | FAP39_01080 | Not Available | - | 231488 - 233431 | 71243.4 |
| rod shape-determining protein mred | FAP39_01085 | Not Available | - | 233428 - 233967 | 19420.7 |
| rod shape-determining protein mrec | FAP39_01090 | Not Available | - | 233960 - 234868 | 33178.0 |
| rod shape-determining protein | FAP39_01095 | Not Available | - | 234933 - 235973 | 36539.5 |
| arylsulfatase | FAP39_01100 | Not Available | - | 236234 - 237775 | 57735.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.