Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FAP39_00115 | Not Available | + | 22500 - 23009 | 18298.6 |
| glutamate--cysteine ligase | FAP39_00120 | Not Available | + | 23076 - 24446 | 50530.0 |
| hypothetical protein | FAP39_00125 | Not Available | - | 24466 - 25767 | 47789.7 |
| duf805 domain-containing protein | FAP39_00130 | Not Available | - | 25903 - 26457 | 21176.0 |
| hypothetical protein | FAP39_00135 | Not Available | - | 26542 - 27417 | 33830.8 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | FAP39_00140 | Not Available | - | 27423 - 28028 | 21098.5 |
| dihydroorotase | FAP39_00145 | Not Available | - | 28028 - 29305 | 45667.0 |
| hypothetical protein | FAP39_00150 | Not Available | - | 29370 - 29798 | 15547.2 |
| hypothetical protein | FAP39_00155 | Not Available | - | 29875 - 30438 | 19860.1 |
| aspartate carbamoyltransferase catalytic subunit | FAP39_00160 | Not Available | - | 30541 - 31488 | 34901.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.