Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FAP39_01715 | Not Available | + | 365093 - 365629 | 19745.6 |
| (d)cmp kinase | FAP39_01720 | Not Available | + | 365738 - 366346 | 21152.3 |
| helix-turn-helix transcriptional regulator | FAP39_01725 | Not Available | - | 366350 - 366760 | 15377.4 |
| nad(p)h-dependent oxidoreductase | FAP39_01730 | Not Available | + | 366856 - 367497 | 23936.6 |
| hypothetical protein | FAP39_01735 | Not Available | + | 367714 - 367902 | 6920.35 |
| 30s ribosomal protein s1 | FAP39_01740 | Not Available | + | 368137 - 369801 | 60810.1 |
| integration host factor subunit beta | FAP39_01745 | Not Available | + | 370158 - 370439 | 10754.9 |
| lapa family protein | FAP39_01750 | Not Available | + | 370443 - 370793 | 12984.1 |
| phosphoribosylanthranilate isomerase | FAP39_01755 | Not Available | + | 370884 - 371552 | 23486.5 |
| tryptophan synthase subunit beta | FAP39_01760 | Not Available | + | 371624 - 372862 | 45214.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.