Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FAP39_01360 | Not Available | + | 296299 - 296679 | 14268.3 |
| crp/fnr family transcriptional regulator | FAP39_01365 | Not Available | + | 296761 - 297456 | 25612.1 |
| lrp/asnc family transcriptional regulator | FAP39_01370 | Not Available | - | 297470 - 297928 | 17291.9 |
| indolepyruvate ferredoxin oxidoreductase family protein | FAP39_01375 | Not Available | + | 298066 - 301509 | 124740.0 |
| tyrosine recombinase xerc | FAP39_01380 | Not Available | - | 301506 - 302432 | 33535.5 |
| duf484 family protein | FAP39_01385 | Not Available | - | 302429 - 303136 | 25923.0 |
| fructose-6-phosphate aldolase | FAP39_01390 | Not Available | - | 303340 - 303993 | 23176.0 |
| primosomal protein n' | FAP39_01395 | Not Available | + | 304054 - 306306 | 81810.5 |
| yeee/yede family protein | FAP39_01400 | Not Available | - | 306408 - 307472 | 36278.0 |
| mfs transporter | FAP39_01405 | Not Available | + | 307612 - 308832 | 45044.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.