Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| recombinase family protein | FAP39_17045 | Not Available | - | 3495403 - 3497097 | 62645.4 |
| hypothetical protein | FAP39_17050 | Not Available | - | 3497468 - 3497893 | 16138.1 |
| type ii toxin-antitoxin system pemk/mazf family toxin | FAP39_17055 | Not Available | - | 3497904 - 3498545 | 24258.4 |
| hypothetical protein | FAP39_17060 | Not Available | + | 3498995 - 3500422 | 53692.1 |
| hypothetical protein | FAP39_17065 | Not Available | + | 3500531 - 3500917 | 14057.5 |
| hypothetical protein | FAP39_17070 | Not Available | - | 3501656 - 3502279 | 22206.9 |
| hypothetical protein | FAP39_17075 | Not Available | - | 3502983 - 3507269 | 146375.0 |
| Trna-met | Not Available | Not Available | + | 3507749 - 3507825 | Not Available |
| Trna-ala | Not Available | Not Available | + | 3511435 - 3511510 | Not Available |
| Trna-ile | Not Available | Not Available | + | 3511588 - 3511664 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.