Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cdp-alcohol phosphatidyltransferase family protein | FAP39_17000 | Not Available | - | 3484799 - 3485692 | 32126.0 |
| hypothetical protein | FAP39_17005 | Not Available | + | 3485640 - 3486857 | 44290.1 |
| ompa family protein | FAP39_17010 | Not Available | - | 3486873 - 3487541 | 23735.9 |
| dna adenine methylase | FAP39_17015 | Not Available | + | 3487708 - 3488604 | 34000.5 |
| urea abc transporter substrate-binding protein | FAP39_17020 | Not Available | + | 3489213 - 3490493 | 45943.1 |
| urea abc transporter permease subunit urtb | FAP39_17025 | Not Available | + | 3490560 - 3492515 | 69167.8 |
| urea abc transporter permease subunit urtc | FAP39_17030 | Not Available | + | 3492519 - 3493748 | 44054.4 |
| urea abc transporter atp-binding protein urtd | FAP39_17035 | Not Available | + | 3493745 - 3494485 | 27059.8 |
| urea abc transporter atp-binding subunit urte | FAP39_17040 | Not Available | + | 3494489 - 3495184 | 25302.1 |
| Trna-pseudo | Not Available | Not Available | + | 3495349 - 3495424 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.