Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FAP39_16950 | Not Available | + | 3476620 - 3476889 | 10166.5 |
| atp-binding protein | FAP39_16955 | Not Available | - | 3476899 - 3478746 | 69748.3 |
| hypothetical protein | FAP39_16960 | Not Available | - | 3478756 - 3479517 | 28830.4 |
| hypothetical protein | FAP39_16965 | Not Available | - | 3479609 - 3480637 | 37752.6 |
| hypothetical protein | FAP39_16970 | Not Available | - | 3480900 - 3481277 | 13390.9 |
| duf2948 family protein | FAP39_16975 | Not Available | - | 3481368 - 3481844 | 17150.4 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | FAP39_16980 | Not Available | - | 3481847 - 3483112 | 44498.2 |
| Trna-thr | Not Available | Not Available | + | 3483370 - 3483444 | Not Available |
| hypothetical protein | FAP39_16990 | Not Available | - | 3483434 - 3483616 | 6963.59 |
| hypothetical protein | FAP39_16995 | Not Available | + | 3483682 - 3484755 | 38309.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.