Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FAP39_16850 | Not Available | + | 3457458 - 3457685 | 8851.41 |
| hypothetical protein | FAP39_16855 | Not Available | + | 3457679 - 3458500 | 30430.5 |
| hypothetical protein | FAP39_16860 | Not Available | - | 3458568 - 3459290 | 27957.6 |
| fic family protein | FAP39_16865 | Not Available | + | 3459465 - 3460562 | 40483.4 |
| addiction module antitoxin | FAP39_16870 | Not Available | + | 3460633 - 3460887 | 9459.98 |
| Trna-met | Not Available | Not Available | + | 3461337 - 3461407 | Not Available |
| hypothetical protein | FAP39_16880 | Not Available | - | 3461837 - 3462064 | 8190.62 |
| is5/is1182 family transposase | FAP39_16885 | Not Available | - | 3462838 - 3464220 | 52289.9 |
| trap transporter permease | FAP39_16890 | Not Available | - | 3464715 - 3466937 | 78930.6 |
| duf1850 domain-containing protein | FAP39_16895 | Not Available | - | 3466941 - 3467561 | 23114.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.