Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf882 domain-containing protein | FAP39_16730 | Not Available | - | 3426782 - 3427456 | 24666.5 |
| hypothetical protein | FAP39_16735 | Not Available | - | 3427573 - 3427833 | 9156.43 |
| vwa domain-containing protein | FAP39_16745 | Not Available | - | 3428694 - 3431341 | 94518.6 |
| hypothetical protein | FAP39_16750 | Not Available | + | 3431342 - 3432687 | 46077.9 |
| hypothetical protein | FAP39_16765 | Not Available | + | 3435206 - 3436186 | 35894.1 |
| hypothetical protein | FAP39_16770 | Not Available | - | 3436170 - 3436445 | 10125.0 |
| hypothetical protein | FAP39_16775 | Not Available | - | 3436570 - 3438195 | 60061.0 |
| transposase family protein | FAP39_16780 | Not Available | - | 3438281 - 3439270 | 37144.0 |
| glucose-1-phosphate cytidylyltransferase | FAP39_16785 | Not Available | + | 3440461 - 3441228 | 28660.1 |
| cdp-glucose 4,6-dehydratase | FAP39_16790 | Not Available | + | 3441225 - 3442274 | 38375.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.