Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FAP39_16400 | Not Available | - | 3360879 - 3361115 | 8530.13 |
| merr family transcriptional regulator | FAP39_16405 | Not Available | + | 3361187 - 3361612 | 15910.9 |
| hypothetical protein | FAP39_16410 | Not Available | - | 3361723 - 3362718 | 37422.7 |
| hypothetical protein | FAP39_16415 | Not Available | + | 3363084 - 3363539 | 16699.0 |
| arylsulfatase | FAP39_16420 | Not Available | + | 3363855 - 3365144 | 47130.2 |
| hypothetical protein | FAP39_16425 | Not Available | + | 3365114 - 3365476 | 12935.2 |
| transposase | FAP39_16430 | Not Available | + | 3365673 - 3365960 | 11125.5 |
| rida family protein | FAP39_16450 | Not Available | - | 3368623 - 3369018 | 14179.1 |
| wyl domain-containing protein | FAP39_16455 | Not Available | + | 3369107 - 3369826 | 27326.8 |
| amidase | FAP39_16460 | Not Available | - | 3370101 - 3371501 | 50392.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.