Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chaperonin groel | FAP39_16140 | Not Available | + | 3306811 - 3308457 | 57595.4 |
| dmt family transporter | FAP39_16145 | Not Available | + | 3308673 - 3309506 | 28878.5 |
| n-acetyltransferase | FAP39_16150 | Not Available | + | 3309584 - 3310051 | 16648.2 |
| alpha/beta fold hydrolase | FAP39_16155 | Not Available | + | 3310105 - 3310830 | 26319.6 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | FAP39_16160 | Not Available | - | 3310950 - 3312026 | 38746.2 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | FAP39_16165 | Not Available | - | 3312019 - 3312507 | 16766.3 |
| duf465 domain-containing protein | FAP39_16170 | Not Available | - | 3312555 - 3312779 | 8624.51 |
| hsp20 family protein | FAP39_16175 | Not Available | + | 3312938 - 3313351 | 15263.2 |
| duf1150 family protein | FAP39_16180 | Not Available | + | 3313355 - 3313582 | 8583.94 |
| hypothetical protein | FAP39_16185 | Not Available | + | 3313692 - 3314555 | 32055.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.