Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coa pyrophosphatase | FAP39_16090 | Not Available | + | 3298764 - 3299360 | 21918.3 |
| cca trna nucleotidyltransferase | FAP39_16095 | Not Available | + | 3299375 - 3300508 | 41106.4 |
| hypothetical protein | FAP39_16100 | Not Available | + | 3301052 - 3301387 | 12200.6 |
| is256 family transposase | FAP39_16105 | Not Available | + | 3301475 - 3301698 | 8286.11 |
| Trna-phe | Not Available | Not Available | + | 3302176 - 3302250 | Not Available |
| manganese-dependent inorganic pyrophosphatase | FAP39_16115 | Not Available | - | 3302577 - 3303497 | 32874.3 |
| trab/gumn family protein | FAP39_16120 | Not Available | - | 3303652 - 3304722 | 39793.1 |
| hypothetical protein | FAP39_16125 | Not Available | + | 3304824 - 3305480 | 23689.3 |
| two pore domain potassium channel family protein | FAP39_16130 | Not Available | + | 3305531 - 3306304 | 28569.1 |
| co-chaperone groes | FAP39_16135 | Not Available | + | 3306483 - 3306770 | 10152.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.